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COVID19-NMR

COVID19-NMR

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Publications

DOI

Biomolecular NMR Assignments (2021) published online

1H, 13C, 15N and 31P chemical shift assignment for stem‐loop 4 from the 5′‐UTR of SARS‐CoV‐2

J. Vögele, J.‐P. Ferner, N. Altincekic, J. K. Bains, B. Ceylan, B. Fürtig, J. T. Grün, M. Hengesbach, K. F. Hohmann, D. Hymon, B. Knezic, F. Löhr, S. A. Peter, D. Pyper, N. S. Qureshi, C. Richter, A. Schlundt, H. Schwalbe, Elke Stirnal, A. Sudakov, A. Wacker, J. E. Weigand, J. Wirmer‐Bartoschek, J. Wöhnert, and E. Duchardt‐Ferner

The SARS-CoV-2 virus is the cause of the respiratory disease COVID-19. As of today, therapeutic interventions in severe COVID-19 cases are still not available as no effective therapeutics have been developed so far. Despite the ongoing devel- opment of a number of effective vaccines, therapeutics to fight the disease once it has been contracted will still be required. Promising targets for the development of antiviral agents against SARS-CoV-2 can be found in the viral RNA genome. The 5′- and 3′-genomic ends of the 30 kb SCoV-2 genome are highly conserved among Betacoronaviruses and contain structured RNA elements involved in the translation and replication of the viral genome. The 40 nucleotides (nt) long highly conserved stem-loop 4 (5_SL4) is located within the 5′-untranslated region (5′-UTR) important for viral replication. 5_SL4 features an extended stem structure disrupted by several pyrimidine mismatches and is capped by a pentaloop. Here, we report extensive 1H, 13C, 15N and 31P resonance assignments of 5_SL4 as the basis for in-depth structural and ligand screening studies by solution NMR spectroscopy.

Funded by


Goethe Corona Fonds

DFG

Volkswagen Stiftung

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Coordination

Prof. Dr. Harald Schwalbe (Coordinator)
Institut für Organische Chemie und Chemische Biologie
Zentrum für Biomolekulare Magnetische Resonanz

Johann Wolfgang Goethe-Universität
N160-3.13
Max-von-Laue-Strasse 7
D-60438 Frankfurt am Main

Contact us

++49 69 798 29737
schwalbe@nmr.uni-frankfurt.de

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